BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H09SP1|AL428809
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1337 1582 0.0
>3x_Contig1337
Length = 7771
Score = 1582 bits (796), Expect = 0.0
Identities = 799/802 (99%)
Strand = Plus / Plus
Query: 53 gttacatatatgacaaaccacgtgactttctgtcacgtgcttcccatccccacgtgacac 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 gttacatatatgacaaaccacgtgactttctgtcacgtgcttcccatccccacgtgacac 2963
Query: 113 taaawtttcttctttttttcctctgccgtccaatgaaatcgccgtgcgtaatgctgacgt 172
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 taaattttcttctttttttcctctgccgtccaatgaaatcgccgtgcgtaatgctgacgt 3023
Query: 173 taccagccacacagaaacacaggttttcaaaggcacgggaaaccgtgggactactcaccg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 taccagccacacagaaacacaggttttcaaaggcacgggaaaccgtgggactactcaccg 3083
Query: 233 ttatataacggatttcaaattgatttggaatttaaacttttactactatgccccagcggc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 ttatataacggatttcaaattgatttggaatttaaacttttactactatgccccagcggc 3143
Query: 293 gctatttgccaagccgtaatctttttcatttttttcccaattcattgtaaatatatatat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 gctatttgccaagccgtaatctttttcatttttttcccaattcattgtaaatatatatat 3203
Query: 353 rtbactatacaaagtttatataaagcttgtacgttttattcacttttttataagcacttc 412
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 attactatacaaagtttatataaagcttgtacgttttattcacttttttataagcacttc 3263
Query: 413 ttcgcagttttctgtatttagtttttagagaaacaatattggaacaagtgtcagacacat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 ttcgcagttttctgtatttagtttttagagaaacaatattggaacaagtgtcagacacat 3323
Query: 473 tgcttgagctgttggttggtttttgtttgcactcgcagtatctatttgaattctcataga 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 tgcttgagctgttggttggtttttgtttgcactcgcagtatctatttgaattctcataga 3383
Query: 533 cgtttttcaaagaaaataaagttgaggtgattttttgagaagtgaaaccaagggaacaaa 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 cgtttttcaaagaaaataaagttgaggtgattttttgagaagtgaaaccaagggaacaaa 3443
Query: 593 cctggaataagtggggaacaaaacacaagaacggttttatttgtagatattggtttatca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3444 cctggaataagtggggaacaaaacacaagaacggttttatttgtagatattggtttatca 3503
Query: 653 gcagtactgctctgctatacaattttaactatttggtaaaaataagaccagaataacaat 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 gcagtactgctctgctatacaattttaactatttggtaaaaataagaccagaataacaat 3563
Query: 713 atattataacatattcagaaactagaactacatgtccgtggttgcaattaaaaacgctgt 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3564 atattataacatattcagaaactagaactacatgtccgtggttgcaattaaaaacgctgt 3623
Query: 773 gtcaaaactcgtagcgaaaaatcaggaagttccattactatcatccgatagttctaattc 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 gtcaaaactcgtagcgaaaaatcaggaagttccattactatcatccgatagttctaattc 3683
Query: 833 caattcgaattctaccactaat 854
||||||||||||||||||||||
Sbjct: 3684 caattcgaattctaccactaat 3705
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8102
Number of Sequences: 1807
Number of extensions: 8102
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)